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Introduction Version

Quality Control

TASK
Typing name :  TASK.gws_scomix.FastqcInit Brick :  gws_scomix

check the quality of reads using fastqc

FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis.

Input

Fastq folder
folder containing reads

Output

Quality result
reads quality report

Configuration

threads

Optional

Number of threads

Type : intDefault value : 8