Qiime2 taxa composition annotator - gws_ubiome

Typing name : TASK.gws_ubiome.Qiime2TableDbAnnotator

Brick : gws_ubiome

Performs Qiime2 taxa composition annotator with a given db

Qiime2TableDbAnnotator class.

[Mandatory]: - taxa table coming from qiime2 taxa compo : Expcted format (included in the qiime2 diversity folder output object): index k__Bacteria;p__Fi;c__Clo;o__Clostri;f__toto;g__gege;s__titi sample_1 1205 sample_2 1705

- metadata file must follow specific nomenclature (columns are tab separated):

    Expected format :
        # tax_id        annotation_info
        bact_1  0
        bact_2  1
        bact_3  Variable;toto_1:0;others:1

Input

Diversity_qiime2_folder

Folder

Annotation_table

Annotation table: taxa<tabulation>info

File

Output

Relative_Abundance_Annotated_Table

2d excel like table

Table

Relative_Abundance_Annotated_Plotly_Resource

Plotly resource

Absolute_Abundance_Annotated_Table

2d excel like table

Table

Absolute_Abundance_Annotated_Plotly_Resource

Plotly resource