Create a metadata table (tab separator) from a fastq folder
Input
Folder_folder
FASTQ folder
Output
Metadata_file
Metadata file
Configuration
sequencing_type
Type of sequencing strategy [Respectively, options : paired-end, single-end]. Default = paired-end
string
paired-end
forward_file_differentiator
Paired-end sequencing forward file name differanciator, e.g: sample-A_R1.fastq.gz
string
_R1
reverse_file_differentiator
Paired-end sequencing forward file name differanciator, e.g: sample-A_R2.fastq.gz
string
_R2
metadata_file_name
Choose an output metadata file name
string
metadata.txt