Introduction Feature Frequency Table importer Feature Table importer Make metadata manifest Metagenome seq env task old_Q2FeatureInferenceSE Q2FeatureInferencePE Q2FeatureInferenceSE Q2GreengenesDiversity Q2NCBIDiversity Q2QualityCheck Q2RarefactionAnalysis Q2RDPDiversity Q2SilvaDiversity Qiime single-end sample frequencies Qiime1 env task Qiime2 ANCOM differential analysis Qiime2 env task Qiime2 feature frequencies (paired-end) Qiime2 manifest table exporter Qiime2 manifest table importer Qiime2 metadata table exporter Qiime2 metadata table importer Qiime2 metadata table maker Qiime2 rarefaction analysis Qiime2 taxa composition annotator Quality Table importer Rarefaction Table importer Taxonomy Table importer Taxonomy Table importer
Technical Documentation
Resources
Tasks
Qiime2 ANCOM differential analysis
Perform ANCOM differential analysis using metadata information
Qiime2DifferentialAnalysis class.
This task perform ANCOM differential analysis test (integrated to Qiime2 suite) using input metadata informations.
For more information: the ANCOM test is a well described in the original paper: https://www.tandfonline.com/doi/full/10.3402/mehd.v26.27663
Input
Output
Configuration
metadata_column
Column on which the differential analysis will be performed
stringthreads
Number of threads
int2