Menu
Introduction
Getting Started
ID Card
Update Biota Database
Release notes
Technical documentations
Version
Publication date

Mar 9, 2022

Confidentiality
Public
Reactions
0
Share

Protein db creator

TASK
6 times
100 %
59 minutes, 33 seconds
Typing name :  TASK.gws_biota.ProteinDBCreator Brick :  gws_biota

Download the online file uniprot_sprot.fasta.gz from uniprot database and use it to load the “biota_protein” table from the BIOTA database.

Base class

Input

Text
Resource that holds a text
Optional

Output

Text
Resource that holds a text
Optional

Configuration

protein_file

Optional

Type : stringDefault value : https://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/complete/uniprot_sprot.fasta.gz
Shine Logo
Technical bricks to reuse or customize

Have you developed a brick?

Share it to accelerate projects for the entire community.