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Publication date

Mar 9, 2022

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EC number to Bigg ID

TASK
Typing name :  TASK.gws_biota.BiGGIdentifiersToEcNumber Brick :  gws_biota

Adds BiGG identifiers for each set (Ec number / kcat)

Base class

Input

Table containing ec number
2d excel like table
BiGG Models json file about organism of internet

Output

Results
Table containing the correspondance between bigg id, ec_number and kcat

Configuration

organism_name

Optional

Type : stringDefault value : Saccharomyces cerevisiae

model_BiGG_id

Optional

Type : stringDefault value : iMM904
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