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News in 0.12.6 Product features Technical features Bug Fixes Breaking Changes
Contributor(s)
BM
Benjamin M
NL
Nour L
MB
Maëva B
Publication date

Mar 9, 2022

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version 0.12.6

News in 0.12.6


Product features


  • None

    Technical features


    • CompoundService: batch size for compound insertion reduced from 50,000 to 5,000 (COMPOUND_BATCH_SIZE = 5000) to prevent max_allowed_packet errors on large ChEBI records
      • CompoundService: SET SESSION max_allowed_packet = 1073741824 (1 GB) is now applied at the start of each compound insertion session

        Bug Fixes


        • Fixed (1153, "Got a packet bigger than 'max_allowed_packet' bytes") error during Compound DB creation — caused by batches of 50K compounds with long inchi/smiles/JSON fields exceeding MariaDB's packet size limit

          Breaking Changes


          • None


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