GEM Modeling with COBRApy

Necessary bricks
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Publication date

Nov 4, 2025

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Version 2

Detail of the version

Input(s)

Output(s)

Report
Report on the main results for each condition, including the modified flux and estimated biomass.
Aerobic fluxes
Estimated fluxes for each reaction under aerobic conditions.
Anaerobic fluxes
Estimated fluxes for each reaction under aerobic conditions.
ATPM fluxes
Estimated fluxes for each reaction under ATPM optimization.

Parameters

Environment file

Code

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