ITS Funfun Functional Analysis Prediction - gws_ubiome

Typing name : TASK.gws_ubiome.ItsFunfunFunctionalAnalysis

Brick : gws_ubiome

This task permit to predict functional analysis of ITS fungal data using FunFun

FunFun (Fungal Functional predictor) is the tool allows us to evaluate the gene content of an individual fungus or mycobiome based on ITS-amplicon sequencing data.

Input

ASV_count_abundance

File containing the abundance of each ASV across each sample

File

FASTA_of_amplicon_sequences_variants

This file contain FASTA of amplicon sequences variants

File

Output

funfun_out_pipeline

This folder contain the outputs

Folder

Configuration

its_type

ITS type

Type : string

Allowed values : its1 its2