Comparative Genome Visualization

Typing name : TASK.gws_omix.PyGenomeVizCompare

Brick : gws_omix

Comparative genome visualization using pyGenomeViz

Base class

Genome input

A GenBank/GFF3 file or a folder containing one or more supported files

HTML report

prefix

Optional

Output file prefix

Type : string

Default value : pygenomeviz

comparison_mode

Optional

visualization_only: display annotations only; genome_comparison: compare whole genomes; cds_protein_homology: compare homologous CDS/proteins.

Type : string

Allowed values :

visualization_only
genome_comparison
cds_protein_homology

Default value : visualization_only

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