gws_omix

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Hisat2_Index

TASK
Typing name :  TASK.gws_omix.Hisat2_Index Brick :  gws_omix

Build genome index for HISAT2

Generates an index for the reference genome using HISAT2-build. This index is required for alignment using HISAT2.

Input

FASTA Genome
Reference genome in FASTA format

Output

HISAT2 Index
Generated HISAT2 index

Configuration

threads

Optional

Number of threads

Type : intDefault value : 4