Hisat2_Index

TASK

Typing name : TASK.gws_omix.Hisat2_Index

Brick : gws_omix

Build genome index for HISAT2

Generates an index for the reference genome using HISAT2-build. This index is required for alignment using HISAT2.

FASTA Genome

Reference genome in FASTA format

HISAT2 Index

Generated HISAT2 index

threads

Optional

Number of threads

Type : int

Default value : 4

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