Publication dateMar 9, 2022
Confidentiality public Public
Typing name : TASK.gws_omix.Ec_number Brick : gws_omix Mapping blast result to EC number database.
EC number determination.
This task allows getting EC numbers for digital twins reconstruction. It uniprot/swissprot database to map EC number. It takes table generated by Diamond task.
For instance, this task maps Diamond results to EC numbers using the FUNGI EC number database.
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Input
diamond result
Diamond result as Table or TSV/CSV File
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Output
EC number result
Table containing EC numbers mapped from Diamond results
EC number file
Text file with one EC number per line
settings
Configuration
Taxonomic group used to select the EC number reference database.
Type : stringAllowed values : fungi
Default value : fungiTechnical bricks to reuse or customize Have you developed a brick?
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