Live tasks
Magic table dashboard
The Magic Table Dashboard is a powerful, user-friendly tool to quickly transform, analyze, and visualize your table data with ease. Whether you are a data scientist, researcher, or bu...
Resource replace typing name
This is a migration live task. It can be run when a resource type was removed. It replaces the old resource type with the new one. It only replaces the type, the resources must be compatible. L...
Fix unsync experiment and report
This live task fixes experiments and report that were synced then removed from project (which unsync the experiment or report). To use if you have the error : 'You can't change the project of a...
Transform a Network into a Cobra model
This live task allows you to convert a Network build with Constellab into a cobra model. In input, you can give a json File from the ouput of the network exporter task. You can apply cobra functions t...
Motif Search in DNA/Protein Sequences
The following livetask is designed to identify specific motifs within a set of DNA or Protein sequences provided in a FASTA format file.
UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction
PyDESeq2 for differential expression analysis
This livetask utilizes the PyDESeq2 library for differential expression analysis of gene expression data. It takes as input a count table and metadata file
Convert gene names to gene IDs
This livetask streamlines the process of converting gene names to gene IDs by leveraging the MyGeneInfo API and pandas library in Python. It takes a list of gene names stored in a csv format as input.
Convert gene IDs to gene names
This livetask streamlines the process of converting gene IDs to gene names. It takes a list of gene IDs in a csv format as input.
Imputing missing values with iterative method