Publication dateMar 9, 2022
Confidentiality public Public
Typing name : TASK.gws_gena.TwinReducer Brick : gws_gena Perform model reduction based on a digital twin
Class digital twin reduction
Provide a twin in input and set the parameters to get a table of elementary flux modes and a reduction table.
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Input
Digital twin
The digital twin to reduce
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Output
EFM table
The table of elementary flux modes
Reduction table
The reduction table
settings
Configuration
ignore_cofactors
Optional
Set True to ignore cofactors, False otherwise.
Type : bool reversible_reactions
Optional
The list of reversible reactions (EC numbers, Reaction IDs). By default all the reactions are considered irreversible.
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