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Introduction Version

Twin reducer

TASK
Typing name :  TASK.gws_gena.TwinReducer Brick :  gws_gena v

Perform model reduction based on a digital twin

Class digital twin reduction Provide a twin in input and set the parameters to get a table of elementary flux modes and a reduction table.

Input

Digital twin
The digital twin to reduce

Output

EFM table
The table of elementary flux modes
Reduction table
The reduction table

Configuration

ignore_cofactors

Optional

Set True to ignore cofactors, False otherwise.

Type : bool

reversible_reactions

Optional

The list of reversible reactions (EC numbers, Reaction IDs). By default all the reactions are considered irreversible.

Type : list