Publication dateMar 9, 2022
Confidentiality public Public
Typing name : TASK.gws_gena.TransformerMediumTable Brick : gws_gena Task to transform table into Medium table
TransformerMediumTable class
Allows to transform a Table with the right columns names to create a Medium Table.
The Medium Table is a table representing a culture medium composition.
- The first column is the compound name (offical or user-defined name)
[required]
- The next column is the list chebi ids
[required]
For example:
| entity |
chebi_id |
| 2-oxoglutarate |
CHEBI:16810 |
| glutamine |
CHEBI:18050 |
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Input
Initial table
2d excel like table
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Output
Table
2d excel like table
settings
Configuration
The name of the entity column
Type : stringDefault value : entityThe name of the column of ChEBI ID
Type : stringDefault value : chebi_idTechnical bricks to reuse or customize
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