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Introduction Version

Transformer Entity ID Table

TASK
Typing name :  TASK.gws_gena.TransformerEntityIDTable Brick :  gws_gena

Task to transform table into Entity ID

TransformerEntityIDTable class

Allows to transform a Table with the right columns names to create an Entity ID Table.

An Entity ID Table is a table of entity IDs (CheBI IDs, Rhea IDs, EC Numbers, User-defined IDs, ...)

  • The first column the ID of the entity (official or user-defined ID) [required]
  • The next columns are optional [OPTIONAL]

Your File must have at least:

  • a column with the ID of the entity For example:
id name
CHEBI:57972 L-alanine

Input

Initial table
2d excel like table
Table

Output

Table
2d excel like table
Table

Configuration

id_column_name

Optional

The name of the Entity ID column

Type : stringDefault value : entity_id