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Introduction Version

Gap filler

TASK
Typing name :  TASK.gws_gena.GapFiller Brick :  gws_gena v

Fills gaps in networks

GapFiller class.

This process iteratively fills gaps related to dead-end compounds using the biota DB. A gap is detected if a steady compound is a dead-end compound.

Input

Network
The network to gap-fill

Output

Network
The gap-filled network

Configuration

tax_id

The taxonomy id used to fill gaps (Warning: Not active)

Type : string