Convert Model Annotation
This task adds metabolites and reactions identifiers (ChEBI, Rhea and ec-number) to a model
Convert annotation task class
Complete the annotation of a metabolic model thanks to internal correspondence tables. This task can add missing identifiers to metabolics and reactions. For metabolites, it adds ChEBI identifiers. For reactions, it can add Rhea identifiers and EC numbers.
Please provide your metabolic model in input. In output, you will get your model updated and a table summarising the changes made.
Input
Model
The model to annotate
Configuration
metabolites_id
What is the type of metabolite 'id'?
stringBiGG Literal_name Other metabolites_name
What is the type of metabolite 'name'?
stringBiGG Literal_name Other reaction_id
What is the type of reaction 'id'?
stringBiGG Other reaction_name
What is the type of reaction 'name'?
stringBiGG Other