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Introduction Version

Context importer

IMPORTER
Typing name :  TASK.gws_gena.ContextImporter Brick :  gws_gena v

Metabolic context importer

ContextImporter Task

Import a metabolic context

This Tasks also allows to import a context with multiple simulations. So if you have different values of target,lower_bound,upper_bound; set them as a list in your JSON File like this: {"id": "reaction1", "name": "", "lower_bound": [0.04, 0.045, 0.035], "upper_bound": [0.01, 0.008, -0.02], "target": [0.03, -0.003, 0.001], "confidence_score": [1, 1, 1], "variables": [{"reference_id": "Metabolite1", "coefficient": 1.0}]}

Input

File

Output

Network context
Context of metabolic network

Configuration

file_format

Optional

File format

Type : stringAllowed values : json  Default value : json