Mamba env agent - gws_core

Typing name : TASK.gws_core.PyMambaAgent

Brick : gws_core

Agent to run Python snippets in a mamba shell environment.

Mamba-based Python agents allow to execute Python snippets on the fly in isolated conda environments.

Agents are fast and efficient tools to develop, test, use and share code snippets.

Warning: It is recommended to use code snippets comming from trusted sources.

Here is the general documentation for agent: https://constellab.community/bricks/gws_core/latest/doc/developer-guide/agent/getting-started/69820653-52e0-41ba-a5f3-4d9d54561779

Here is the documentation of the agent: https://constellab.community/bricks/gws_core/latest/doc/developer-guide/agent/env-agent/c6acb3c3-2a7c-44cd-8fb2-ea1beccdbdcc

Input

File or folder

Optional

Fs node

Output

File or folder

Fs node

Configuration

params

Optional

Type : dynamic

Default value : [object Object]

env

Optional

YAML configuration of the conda environment

Type : yaml_code_param

Default value :

name: .venv
channels:
  - conda-forge
dependencies:
  - python=3.10
  - pandas==2.2.2
  - numpy==1.26.4

code

Optional

The Python code snippet to execute using shell command

Type : python_code_param

Default value :

# This is a snippet template for a Python agent.
import pandas

# Do the job here ...
data = pandas.read_csv(source_paths[0], header=0, index_col=0, sep=',')

# transform the data
result = data.transpose()

# Write the output file in the target folder
result_path = "result.csv"
result.to_csv(result_path, index=True)
target_paths = [result_path]