Introduction Feature Frequency Table importer Feature Table importer Make metadata manifest Metagenome seq env task old_Q2FeatureInferenceSE Q2FeatureInferencePE Q2FeatureInferenceSE Q2GreengenesDiversity Q2NCBIDiversity Q2QualityCheck Q2RarefactionAnalysis Q2RDPDiversity Q2SilvaDiversity Qiime single-end sample frequencies Qiime1 env task Qiime2 ANCOM differential analysis Qiime2 env task Qiime2 feature frequencies (paired-end) Qiime2 manifest table exporter Qiime2 manifest table importer Qiime2 metadata table exporter Qiime2 metadata table importer Qiime2 metadata table maker Qiime2 rarefaction analysis Qiime2 taxa composition annotator Quality Table importer Rarefaction Table importer Taxonomy Table importer Taxonomy Table importer
Technical Documentation
Resources
Tasks
Qiime2 manifest table exporter
Export Qiime2 manifest table to a file
Generic task that take a file as input and return a resource
Override the export_to_path method to export the resource into a fsNode
Input
Output
Configuration
file_name
File name (without extension)
stringfile_format
File format
stringxlsx xls csv tsv tab txt csvdelimiter
Delimiter character. Only for CSV files
stringauto tab space , ; autowrite_header
Set True to write column names (header), False otherwise
booltruewrite_index
Set True to write row names (index), False otherwise
booltrue